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The effect of taxonomic classification by full-length 16S rRNA sequencing  with a synthetic long-read technology | Scientific Reports
The effect of taxonomic classification by full-length 16S rRNA sequencing with a synthetic long-read technology | Scientific Reports

DAIRYdb: A manually curated gold standard reference database for improved  taxonomy annotation of 16S rRNA gene sequences from dairy products | bioRxiv
DAIRYdb: A manually curated gold standard reference database for improved taxonomy annotation of 16S rRNA gene sequences from dairy products | bioRxiv

Comparison of alignments generated by the RDP, greengenes, and SILVA... |  Download Scientific Diagram
Comparison of alignments generated by the RDP, greengenes, and SILVA... | Download Scientific Diagram

Generation of Comprehensive Ecosystem-Specific Reference Databases with  Species-Level Resolution by High-Throughput Full-Length 16S rRNA Gene  Sequencing and Automated Taxonomy Assignment (AutoTax) | mBio
Generation of Comprehensive Ecosystem-Specific Reference Databases with Species-Level Resolution by High-Throughput Full-Length 16S rRNA Gene Sequencing and Automated Taxonomy Assignment (AutoTax) | mBio

SILVA 16S database - User Support - QIIME 2 Forum
SILVA 16S database - User Support - QIIME 2 Forum

Evaluation of 16S rRNA gene sequencing for species and strain-level  microbiome analysis | Nature Communications
Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis | Nature Communications

USEARCH manual
USEARCH manual

DAIRYdb: a manually curated reference database for improved taxonomy  annotation of 16S rRNA gene sequences from dairy products | BMC Genomics |  Full Text
DAIRYdb: a manually curated reference database for improved taxonomy annotation of 16S rRNA gene sequences from dairy products | BMC Genomics | Full Text

Comparing 16S databases
Comparing 16S databases

16S rDNA sequence analysis of the three water samples using the SILVA... |  Download Scientific Diagram
16S rDNA sequence analysis of the three water samples using the SILVA... | Download Scientific Diagram

Phylogenetic signal of 16S gene copy numbers (SILVA-derived tree). a... |  Download Scientific Diagram
Phylogenetic signal of 16S gene copy numbers (SILVA-derived tree). a... | Download Scientific Diagram

Digital PCR with the SILVA database
Digital PCR with the SILVA database

Evaluation of full-length nanopore 16S sequencing for detection of  pathogens in microbial keratitis [PeerJ]
Evaluation of full-length nanopore 16S sequencing for detection of pathogens in microbial keratitis [PeerJ]

Silva reference files
Silva reference files

RESCRIPt: Reproducible sequence taxonomy reference database management |  PLOS Computational Biology
RESCRIPt: Reproducible sequence taxonomy reference database management | PLOS Computational Biology

The workflow of this study. (A) The taxonomy of 16S rRNA sequences in... |  Download Scientific Diagram
The workflow of this study. (A) The taxonomy of 16S rRNA sequences in... | Download Scientific Diagram

A) Bayesian 16S rRNA gene tree built using the ARB-Silva.de SSU rRNA... |  Download Scientific Diagram
A) Bayesian 16S rRNA gene tree built using the ARB-Silva.de SSU rRNA... | Download Scientific Diagram

SEED2 - TUTORIAL - SILVA 16S REFERENCE - Create local database for BLAST -  YouTube
SEED2 - TUTORIAL - SILVA 16S REFERENCE - Create local database for BLAST - YouTube

Building rRNA classification databases | BioinfTraining
Building rRNA classification databases | BioinfTraining

High quality 16S rRNA sequences were downloaded from the SILVA database...  | Download Scientific Diagram
High quality 16S rRNA sequences were downloaded from the SILVA database... | Download Scientific Diagram

The SILVA Database Project: An ELIXIR core data resource for high-quality  ribosomal RNA sequences | Semantic Scholar
The SILVA Database Project: An ELIXIR core data resource for high-quality ribosomal RNA sequences | Semantic Scholar